Fig. 3

Examples of fusion genes in NSLN positive samples. a The WAC-DNAJC1 fusion identified only in 94812 was revealed by 21 fusion-spanning reads, 16 pair-end reads (with one read spanning the fusion point), and 6 pair-end reads. This fusion was between one-third of exon 3 of WAC (blue) and the whole of exon 10 of DNAJC1 (green). The break point was shown in a red vertical line. The numbers of reliable pair-end and fusion-spanning reads in each sample are indicated to the right of each read. The sample ID is showed in parentheses. b Schematic diagram of genomic locations of IGLL5 and four ensemble non-coding genes fused with IGLL5. Five genes with the fusion are shown in red. c The similar structure for four IGLV1 variables fused with IGLL5. These four genes were aligned to the right and the name, position, and length were shown above each gene. d One example of IGLL5 fusion with a variable of IGLV1, ENSG00000211648 that was only identified in 94812. There are two transcripts of IGLL5 gene and two fused transcripts with ENSG00000211648 correspondingly