Table 4 Gene sets enriched in phenotype high
MSigDB collection | Gene set name | NES | NOM p-value | FDR q-value |
|---|---|---|---|---|
h.all.v6.2.symbols.gmt [Hallmarks] | HALLMARK_G2M_CHECKPOINT | −2.23 | 0.000 | 0.002 |
|  | HALLMARK_E2F_TARGETS | −2.19 | 0.000 | 0.002 |
|  | HALLMARK_MITOTIC_SPINDLE | −2.15 | 0.000 | 0.003 |
|  | HALLMARK_MTORC1_SIGNALING | −2.13 | 0.000 | 0.003 |
|  | HALLMARK_MYC_TARGETS_V1 | −2.10 | 0.000 | 0.005 |
|  | HALLMARK_UNFOLDED_PROTEIN_RESPONSE | −2.01 | 0.002 | 0.011 |
|  | HALLMARK_PROTEIN_SECRETION | −2.00 | 0.000 | 0.011 |
|  | HALLMARK_PI3K_AKT_MTOR_SIGNALING | −1.95 | 0.000 | 0.015 |
|  | HALLMARK_DNA_REPAIR | −1.92 | 0.008 | 0.016 |
|  | HALLMARK_SPERMATOGENESIS | −1.92 | 0.000 | 0.015 |