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Table 2 Basic information of candidate SNPs CYP19A1

From: Association of CYP19A1 rs28757157 polymorphism with lung cancer risk in the Chinese Han population

SNP ID

Chr

Position

Alleles A/B

MAF

p-HWE

Heterozygosity

p

OR (95%CI)

HaploReg

RegulomeDB

Case

Control

rs28757157

Chr15

51,253,204

T/C

0.215

0.174

0.144

0.309

0.025

1.30 (1.03–1.64)

Enhancer histone marks, motifs changed, selected eQTL hits

TF binding + DNase peak

rs3751592

Chr15

51,314,381

C/T

0.133

0.112

0.999

0.199

0.172

1.21 (0.92–1.59)

Promoter histone marks, enhancer histone marks, DNAse, motifs changed, selected eQTL hits

TF binding + DNase peak

rs3751591

Chr15

51,314,513

G/A

0.137

0.133

0.840

0.235

0.798

1.04 (0.80–1.35)

Promoter histone marks, enhancer histone marks, DNAse, motifs changed

TF binding + DNase peak

rs59429575

Chr15

51,314,880

T/C

0.172

0.139

0.248

0.228

0.052

1.28 (1.00–1.64)

Promoter histone marks, enhancer histone marks, DNAse, proteins bound, motifs changed

TF binding or DNase peak

  1. SNP single-nucleotide polymorphism, MAF minor allele frequency, OR odds ratio, 95%CI 95% confidence interval
  2. Bold values indicate statistical significance (p < 0.05)
  3. HWE p values were calculated from two-sided χ2 test
  4. p values were calculated from two-sided χ2 test