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Table 1 The 33 cancer types in TCGA pan-cancer project

From: Pan-cancer analysis of m5C regulator genes reveals consistent epigenetic landscape changes in multiple cancers

Cancer types

Abbr

Normal tissues

Cancer tissues

Mutation

CNV

Kidney Renal Clear Cell Carcinoma

KIRC

72

539

370

531

Kidney Renal Papillary Cell Carcinoma

KIRP

32

289

282

291

Kidney Chromophobe

KICH

24

65

66

69

Brain Lower Grade Glioma

LGG

0

529

526

516

Glioblastoma Multiforme

GBM

5

169

403

580

Breast Invasive Carcinoma

BRCA

113

1109

1026

1083

Lung Squamous Cell Carcinoma

LUSC

49

502

485

504

Lung Adenocarcinoma

LUAD

59

535

569

519

Rectum Adenocarcinoma

READ

10

167

151

168

Colon Adenocarcinoma

COAD

41

480

408

454

Uterine Carcinosarcoma

UCS

0

56

57

59

Uterine Corpus Endometrial Carcinoma

UCEC

35

552

531

542

Ovarian Serous Cystadenocarcinoma

OV

0

379

412

582

Head and Neck Squamous Carcinoma

HNSC

44

502

509

525

Thyroid Carcinoma

THCA

58

510

500

502

Prostate Adenocarcinoma

PRAD

52

499

498

495

Stomach Adenocarcinoma

STAD

32

375

439

444

Skin Cutaneous Melanoma

SKCM

1

471

468

370

Bladder Urothelial Carcinoma

BLCA

19

414

411

411

Liver Hepatocellular Carcinoma

LIHC

50

374

365

373

Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma

CESC

3

306

291

298

Adrenocortical Carcinoma

ACC

0

79

92

93

Pheochromocytoma and Paraganglioma

PCPG

3

183

184

165

Sarcoma

SARC

2

263

239

260

Acute Myeloid Leukemia

LAML

0

151

141

194

Pancreatic Adenocarcinoma

PAAD

4

178

178

187

Esophageal Carcinoma

ESCA

11

162

185

187

Testicular Germ Cell Tumors

TGCT

0

156

151

153

Thymoma

THYM

2

119

123

126

Mesothelioma

MESO

0

86

82

90

Uveal Melanoma

UVM

0

80

80

83

Lymphoid Neoplasm Diffuse Large B-cell Lymphoma

DLBC

0

48

37

51

Cholangiocarcinoma

CHOL

9

36

36

39

In total

 

730

10,363

10,295

10,944