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Table 1 GO enrichment analysis in co-expression modules

From: Identification of key gene modules for human osteosarcoma by co-expression analysis

  Term Gene counts Percent P value Benjamini
Module 1 Cell cycle 66 0.8 1.30E−10 3.10E−07
Negative regulation of cellular protein metabolic process 28 0.4 2.80E−10 3.50E−07
Negative regulation of protein metabolic process 28 0.4 6.80E−10 5.60E−07
Negative regulation of protein ubiquitination 18 0.2 7.50E−10 4.70E−07
Anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process 16 0.2 7.10E−09 3.50E−06
Module 2 Translational elongation 51 0.8 4.20E−53 8.70E−50
Translation 61 0.9 2.60E−34 2.70E−31
Generation of precursor metabolites and energy 30 0.5 2.00E−09 1.40E−06
Oxidative phosphorylation 17 0.3 3.40E−09 1.70E−06
Ribosomal large subunit biogenesis 6 0.1 2.40E−06 1.00E−03
Module 3 ATP synthesis coupled proton transport 6 0.3 9.40E−05 4.50E−02
Energy-coupled proton transport, down electrochemical gradient 6 0.3 9.40E−05 4.50E−02
Module 4 Translational elongation 14 0.7 1.40E−11 1.50E−08
Translation 18 0.9 2.00E−08 1.10E−05
Module 5 Antigen processing and presentation 12 1.7 1.30E−13 8.60E−11
Antigen processing and presentation of peptide or polysaccharide antigen via MHC class II 8 1.1 1.50E−10 4.70E−08
Immune response 20 2.8 2.20E−10 4.70E−08
Antigen processing and presentation of peptide antigen 6 0.8 1.80E−07 2.90E−05
Antigen processing and presentation of exogenous peptide antigen 4 0.6 1.60E−05 2.10E−03