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Table 2 Altered canonical pathways in each group

From: Heavy alcohol drinking downregulates ALDH2 gene expression but heavy smoking up-regulates SOD2 gene expression in head and neck squamous cell carcinoma

 

-Log (p value)

Ratio

z-score

Molecules

Altered pathways in ALDH2 high-expressed group

    

 Role of NFAT in regulation of the immune response

4.82E00

2.34E−01

3.157

BLNK,CD247,RAF1,HLA-DOA,CD3E,CD4,GNA11,FCER1A,HLA-DQA1

 Cdc42 signaling

3E00

2.04E−01

−2.828

CD247,RAF1,HLA-DOA,MAP3K11,CD3E,ARPC1B,HLA-DQA1,CDC42EP2

 Lymphotoxin β receptor signaling

1.32E00

2.04E−01

2.714

IKBKB,MAP3K14,VCAM1,AKT1,CASP9,LTA,PIK3CG,LTB,IKBKE,PIK3CB

 RhoA signaling

4.37E−01

1.31E−01

−2.309

NEDD4,CFL1,NRP2,ARPC1B,ANLN,GNA12,RTKN

 Intrinsic prothrombin activation pathway

5.98E−01

1.72E−01

−2.236

COL1A2,COL1A1,COL5A3,COL10A1,COL3A1

Altered pathways in SOD2 high-expressed group

    

 TREM1 signaling

8.12E00

2.27E−01

3.638

RELA,CXCL8,TREM1,NLRP3,PLCG1,IL6,CCL3,NOD2,CCL2,CASP1

 PPAR signaling

3.95E00

1.4E−01

−3.606

RELA,IL36G,IL1A,NRAS,RRAS2,NFKBIA,HSP90AB1,PPARD,IL1B

 PI3K/AKT signaling

3.78E00

1.22E−01

2.324

TSC1,RELA,NRAS,YWHAH,PIK3R1,MAP3K5,ITGA3,NFKBIA,RRAS2

 Protein kinase A signaling

3.16E00

7.77E−02

−2.294

RELA,YWHAH,PDE7A,PTPN2,ANAPC10,PTPN12,GNG7,PHKA2,GNB3

 TNFR1 signaling

1.83E00

1.22E−01

2.236

RELA,NFKBIA,TNFAIP3,NFKBIB,TNF,CASP7

 IL-1 signaling

3.45E00

1.32E−01

2.121

RELA,IL1A,GNB3,NFKBIA,GNA15,GNB2,ADCY6,IRAK3,NFKBIB,GNG5