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Table 1 Genetic mutations with single nucleotide variant of mutant allele frequency > 5% detected only in tumors and bile ducts compared to normal tissue

From: A case report of carcinoma of the papilla of Vater associated with a hyperplasia–dysplasia–carcinoma sequence by pancreaticobiliary maljunction

     

MAF

Genes

Amino acid

Type

Reference

Allele

Tumor

(Carcinoma)

Bile duct

(Hyperplasia)

Normal tissue

(Pancreas)

ERBB2

p.S310Y

SNV

C

A, T

81.95%

  

POU5F1

p.R201Q

SNV

C

T

12.43%

  

FLT1

p.D974N

SNV

C

T

9.91%

  

NCOA2

p.E189K

SNV

C

T

8.00%

  

KMT2D

p.P3621R

SNV

G

C

7.14%

  

EZH2

p.R313Q

SNV

C

T

6.73%

  

CSMD3

p.R2944T

SNV

C

G

6.60%

  

TSC2

p.S1132L

SNV

C

T

6.20%

  

MARK1

p.R771H

SNV

G

A

6.02%

  

AKAP9

p.S3767L

SNV

C

T

5.51%

  

NUP214

p.V1720A

SNV

T

C

5.26%

  

RB1

p.V735I

SNV

G

A

5.08%

  

KIT

p.H263Q

SNV

T

G

 

11.03%

 

ERBB4

p.R488Q

SNV

C

T

 

7.75%

 

MITF

p.S258L

SNV

C

T

 

7.61%

 

UBR5

p.I810V

SNV

T

C

 

5.77%

 

USP9X

p.R2551Q

SNV

G

A

 

5.19%

 
  1. SNV, single nucleotide variant; MAF, Mutant allele frequency