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Table 1 Primer sequences used for PCR

From: Correlation between mutational status and survival and second cancer risk assessment in patients with gastrointestinal stromal tumors: a population-based study

Location

Primer sequence

Size (in bp)

c-KIT exon 9

F: 5′-TCCTAGAGTAAGCCAGGGCTT-3′

283

R: 5′-TGGTAGACAGAGCCTAAACATCC-3′

c-KIT exon 11

F: 5′-CCAGAGTGCTCTAATGACTG-3′

215

R: 5′-AGCCCCTGTTTCATACTGAC-3′

c-KIT exon 13

F: 5′-GCTTGACATCAGTTTGCCAG-3′

193

R: 5′-AAAGGCAGCTTGGACACGGCTTTA-3′

c-KIT exon 17

F: 5′-GGTTTTCTTTTCTCCTCCAACC-3′

203

R: 5′-GATTTACATTATGAAAGTCACAGG-3′

PDGFRA exon 12

F: 5′-CCAGTTACCTGTCCTGGTCAT-3′

183

R: 5′-GGAGGTTACCCCATGGAACT-3′

PDGFRA exon 18

F: 5′-TACAGATGGCTTGATCCTGAGT-3′

212

R: 5′-AGTGAAGGAGGATGAGCCTG-3′

BRAF exon 15

F: 5′AAACTCTTCATAATGCTTGCTCTG 3′

200

R: 5′GGCCAAAAA TTTAATCAGTGG A 3′

  1. bp, base pair.